ChIP-MS proteomics to identify novel interaction partners of FANCD2

FANCD2 ChIP-MS experiments in refined synchronized HCT116 cells with different types of replication stress are performed to identify additional proteins involved in the resolution of UFBs. Through reciprocal ChIP-MS and colocalization analysis by immunofluorescence experiments observed interactions will be validated. In collaboration with SP-Z promising candidates will be prioritized and subsequently tested for their contribution to the resolution of UFBs and chromosome segregation. In collaboration with SP-1 we address to idenfiy proteins involved in R-loop management and therefore, we will isolate FANCD2 containing chromatin complexes under conditions that lead to up- and downregulation of RNA/DNA hybrids.

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Created: 7th Feb 2022 at 16:35

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